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Epitope	MHC	MHC Class	Host Species	Source Organism	Source Molecule	cdr3_TRA_count	cdr3_TRB_count	Model Name
GILGFVFTL	A0201	MHCI	HomoSapiens	Influenza A	Matrix protein 1	5014	5854	A0201_GILGFVFTL
DIYKGVYQFKSV	H2-Ab	MHCII	MusMusculus	Mammarenavirus choriomeningitidis	glycoprotein	3604	3632	H2-Ab_DIYKGVYQFKSV
NLVPMVATV	A0201	MHCI	HomoSapiens	CMV	65 kDa lower matrix phosphoprotein	2631	4886	A0201_NLVPMVATV
TFEYVSQPFLMDLE	DPA10103-DPB10401	MHCII	HomoSapiens	SARS-CoV-2	surface glycoprotein [Severe acute respiratory syndrome coronavirus 2]	844	886	DPA10103-DPB10401_TFEYVSQPFLMDLE
YLQPRTFLL	A0201	MHCI	HomoSapiens	SARS-CoV-2	Spike glycoprotein	801	1021	A0201_YLQPRTFLL
LLAGIGTVPI	A0201	MHCI	HomoSapiens	Homo sapiens	solute carrier organic anion transporter family member 2A1	599	853	A0201_LLAGIGTVPI
SSYRRPVGI	H2-Kb	MHCI	MusMusculus	Influenza A	PB1 polymerase subunit	599	601	H2-Kb_SSYRRPVGI
RAKFKQLL	B0801	MHCI	HomoSapiens	EBV	Lytic switch protein BZLF1	560	1006	B0801_RAKFKQLL
GLCTLVAML	A0201	MHCI	HomoSapiens	EBV	BMLF1 protein	551	1462	A0201_GLCTLVAML
SPRWYFYYL	B0702	MHCI	HomoSapiens	SARS-CoV-2	Nucleoprotein	547	673	B0702_SPRWYFYYL
LLWNGPMAV	A0201	MHCI	HomoSapiens	YFV	polyprotein	492	608	A0201_LLWNGPMAV
LLLDRLNQL	A0201	MHCI	HomoSapiens	SARS-CoV-2	Nucleoprotein	464	492	A0201_LLLDRLNQL
TTDPSFLGRY	A0101	MHCI	HomoSapiens	SARS-CoV-2	Replicase polyprotein 1a	436	461	A0101_TTDPSFLGRY
SSLENFRAYV	H2-Db	MHCI	MusMusculus	Influenza A	Polymerase acidic protein	433	430	H2-Db_SSLENFRAYV
YVLDHLIVV	A0201	MHCI	HomoSapiens	EBV	BRLF1	409	673	A0201_YVLDHLIVV
LLLGIGILV	A0201	MHCI	HomoSapiens	Homo sapiens	Bone marrow stromal antigen 2	384	232	A0201_LLLGIGILV
HGIRNASFI	H2-Db	MHCI	MusMusculus	MuHV-1	pM45	294	294	H2-Db_HGIRNASFI
ASNENMETM	H2-Db	MHCI	MusMusculus	Influenza A	nucleoprotein	291	291	H2-Db_ASNENMETM
VMATRRNVL	E0103	MHCI	HomoSapiens	Mycobacterium tuberculosis	Uncharacterized protein MT1568	283	285	E0103_VMATRRNVL
CINGVCWTV	A0201	MHCI	HomoSapiens	HCV	polyprotein	267	391	A0201_CINGVCWTV
ANYKFTLV	H2-Kb	MHCI	MusMusculus	Trypanosoma cruzi	trans-sialidase	249	272	H2-Kb_ANYKFTLV
CTELKLSDY	A0101	MHCI	HomoSapiens	Influenza A	nucleocapsid protein [Influenza A virus (A/California/07/2009(H1N1))]	167	241	A0101_CTELKLSDY
FRDYVDRFYKTLRAEQASQE		MHCII	HomoSapiens	HIV-1	Gag polyprotein	166	376	na_FRDYVDRFYKTLRAEQASQE
QYIKWPWYI	A2402	MHCI	HomoSapiens	SARS-CoV-2	Spike glycoprotein	159	168	A2402_QYIKWPWYI
LSLRNPILV	H2-Db	MHCI	MusMusculus	Influenza A	Protein PB1-F2	159	160	H2-Db_LSLRNPILV
SSPPMFRV	H2-Kb	MHCI	MusMusculus	MuHV-1	M38 protein [Murid betaherpesvirus 1]	158	258	H2-Kb_SSPPMFRV
FLRGRAYGL	B0801	MHCI	HomoSapiens	EBV	nuclear antigen EBNA-3	149	183	B0801_FLRGRAYGL
ATDALMTGF	A0101	MHCI	HomoSapiens	HCV	Genome polyprotein	142	163	A0101_ATDALMTGF
LTDEMIAQY	A0101	MHCI	HomoSapiens	SARS-CoV-2	Spike glycoprotein	136	137	A0101_LTDEMIAQY
KTFPPTEPK	A0301	MHCI	HomoSapiens	SARS-CoV-1	Nucleoprotein	131	175	A0301_KTFPPTEPK
VMTTVLATL	E0103	MHCI	HomoSapiens	Mycobacterium tuberculosis	Uncharacterized protein Rv1734c/MT1774.1	129	129	E0103_VMTTVLATL
GLIYNRMGAVTTEV	DRB10101	MHCII	HomoSapiens	Influenza A	Matrix protein 1	124	121	DRB10101_GLIYNRMGAVTTEV
ELAGIGILTV	A0201	MHCI	HomoSapiens	Homo sapiens	Melanoma antigen recognized by T-cells 1	121	1161	A0201_ELAGIGILTV
DATYQRTRALVR	A6801	MHCI	HomoSapiens	Influenza A	Nucleoprotein	115	121	A6801_DATYQRTRALVR
IVTDFSVIK	A1101	MHCI	HomoSapiens	EBV	Epstein-Barr nuclear antigen 4	113	139	A1101_IVTDFSVIK
TVYGFCLL	H2-Kb	MHCI	MusMusculus	MCMV	m139 protein	108	108	H2-Kb_TVYGFCLL
TPRVTGGGAM	B0702	MHCI	HomoSapiens	CMV	64 kDa lower matrix phosphoprotein	106	325	B0702_TPRVTGGGAM
QARQMVQAMRTIGTHP	DRB10101	MHCII	HomoSapiens	Influenza A	Matrix protein 1	105	124	DRB10101_QARQMVQAMRTIGTHP
KSKRTPMGF	B5701	MHCI	HomoSapiens	HCV	polyprotein	104	155	B5701_KSKRTPMGF
SLFFSAQPFEITAST		MHCII	HomoSapiens	Homo sapiens	Apolipoprotein B-100	97	116	na_SLFFSAQPFEITAST
RPPIFIRRL	B0702	MHCI	HomoSapiens	EBV	EBNA3A nuclear protein	94	130	B0702_RPPIFIRRL
PKYVKQNTLKLAT	DRB10101	MHCII	HomoSapiens	Influenza A	hemagglutinin precursor	92	103	DRB10101_PKYVKQNTLKLAT
ALAGIGILTV	A0201	MHCI	HomoSapiens	Homo sapiens	Melanoma antigen recognized by T-cells 1	88	149	A0201_ALAGIGILTV
FLYALALLL	A0201	MHCI	HomoSapiens	EBV	terminal protein LMP2B	87	130	A0201_FLYALALLL
NQKLIANQF	B1501	MHCI	HomoSapiens	SARS-CoV-2	Spike glycoprotein	87	87	B1501_NQKLIANQF
CLGGLLTMV	A0201	MHCI	HomoSapiens	EBV	terminal protein LMP2B	86	139	A0201_CLGGLLTMV
NEGVKAAW		MHCI	HomoSapiens	CMV	45 kDa immediate-early protein 2	85	79	na_NEGVKAAW
QAKWRLQTL	B0801	MHCI	HomoSapiens	EBV	EBNA3A nuclear protein	81	125	B0801_QAKWRLQTL
VSDGGPNLY	A0101	MHCI	HomoSapiens	Influenza A	RNA polymerase	77	79	A0101_VSDGGPNLY
GMFNMLSTVLGVS	DRB10101	MHCII	HomoSapiens	Influenza A	RNA-directed RNA polymerase subunit P1 (Polymerase basic protein 1) (PB1)	74	26	DRB10101_GMFNMLSTVLGVS
SGPLKAEIAQRLED	DRB10101	MHCII	HomoSapiens	Influenza A	Matrix protein 1	73	64	DRB10101_SGPLKAEIAQRLED
KLVALGINAV	A0201	MHCI	HomoSapiens	HCV	NS3	72	90	A0201_KLVALGINAV
RPIIRPATL	B0801	MHCI	HomoSapiens	Influenza B	Nucleoprotein	70	76	B0801_RPIIRPATL
EPLPQGQLTAY	B3501	MHCI	HomoSapiens	EBV	BZLF1	68	96	B3501_EPLPQGQLTAY
PKYVKQNTLKLAT		MHCI	HomoSapiens	Influenza A	hemagglutinin precursor	67	300	na_PKYVKQNTLKLAT
KAVYNFATC	H2-Db	MHCI	MusMusculus	Mammarenavirus choriomeningitidis	glycoprotein precursor	67	70	H2-Db_KAVYNFATC
SQLLNAKYL	H2-Db	MHCI	MusMusculus	Plasmodium berghei	acid phosphatase	65	132	H2-Db_SQLLNAKYL
HPVTKYIM	B0801	MHCI	HomoSapiens			64	71	B0801_HPVTKYIM
NYNYLYRLF	A2402	MHCI	HomoSapiens	SARS-CoV-2	Spike glycoprotein	60	73	A2402_NYNYLYRLF
RLPGVLPRA	A0201	MHCI	HomoSapiens	Homo sapiens		59	48	A0201_RLPGVLPRA
RFPLTFGWCF	A2402	MHCI	HomoSapiens	HIV-1	Protein Nef	58	59	A2402_RFPLTFGWCF
RLQSLQTYV	A0201	MHCI	HomoSapiens	SARS coronavirus BJ01	spike glycoprotein S	57	90	A0201_RLQSLQTYV
RPHERNGFTVL	B0702	MHCI	HomoSapiens	CMV	HCMVUL83	56	83	B0702_RPHERNGFTVL
GPRLGVRAT	B0702	MHCI	HomoSapiens	HCV	polyprotein	54	71	B0702_GPRLGVRAT
NEGVKAAW	B4403	MHCI	HomoSapiens	CMV	45 kDa immediate-early protein 2	53	49	B4403_NEGVKAAW
RTATKQYNV	A0201	MHCI	HomoSapiens			52	94	A0201_RTATKQYNV
MEVTPSGTWL	B4001	MHCI	HomoSapiens	SARS-CoV-2	Nucleoprotein	52	68	B4001_MEVTPSGTWL
QMMVKAGL	B0801	MHCI	HomoSapiens			50	64	B0801_QMMVKAGL
RTATKAYNV	A0201	MHCI	HomoSapiens	SARS-CoV-2	nucleocapsid phosphoprotein [Severe acute respiratory syndrome coronavirus 2]	50	54	A0201_RTATKAYNV
RPRGEVRFL	B0702	MHCI	HomoSapiens	HSV-2	tegument protein VP22	50	54	B0702_RPRGEVRFL
GTRVIRDMTLHSAPS	DQA10102-DQB10602	MHCII	HomoSapiens	Homo sapiens	transcription factor NYD-sp10	48	47	DQA10102-DQB10602_GTRVIRDMTLHSAPS
PTDNYITTY	A0101	MHCI	HomoSapiens	SARS-CoV-2	orf1ab polyprotein [Severe acute respiratory syndrome coronavirus 2]	44	48	A0101_PTDNYITTY
FTSDYYQLY	A0101	MHCI	HomoSapiens	SARS-CoV-2	ORF3a protein	44	45	A0101_FTSDYYQLY
FEDLRVLSF	B3701	MHCI	HomoSapiens	Influenza A	Nucleoprotein	44	44	B3701_FEDLRVLSF
DPFRLLQNSQVFS	DRB10101	MHCII	HomoSapiens			43	104	DRB10101_DPFRLLQNSQVFS
FEDLRLLSF	B3701	MHCI	HomoSapiens	Influenza A	Nucleoprotein	43	43	B3701_FEDLRLLSF
VLFGLGFAI	A0201	MHCI	HomoSapiens	Mus musculus	glucose-6-phosphatase, catalytic, related	42	46	A0201_VLFGLGFAI
HIKEYLNKIQNSLST		MHCII	HomoSapiens	Plasmodium falciparum	Circumsporozoite protein	42	42	na_HIKEYLNKIQNSLST
PSDKHIKEYLNKIQN		MHCII	HomoSapiens	Plasmodium falciparum	Circumsporozoite protein	42	42	na_PSDKHIKEYLNKIQN
YLNKIQNSLSTEWSP		MHCII	HomoSapiens	Plasmodium falciparum	Circumsporozoite protein	42	42	na_YLNKIQNSLSTEWSP
YLLEMLWRL	A0201	MHCI	HomoSapiens	EBV	Latent membrane protein 1	41	69	A0201_YLLEMLWRL
LLYDANYFL	A0201	MHCI	HomoSapiens	SARS-CoV-2	ORF3a protein	41	59	A0201_LLYDANYFL
RPIIRPATL	B0702	MHCI	HomoSapiens	Influenza B	Nucleoprotein	38	55	B0702_RPIIRPATL
HPNGYKSLSTL	B0702	MHCI	HomoSapiens			35	84	B0702_HPNGYKSLSTL
TDLGQNLLY	A0101	MHCI	HomoSapiens	Human adenovirus 5	Hexon protein	35	46	A0101_TDLGQNLLY
VTEHDTLLY	A0101	MHCI	HomoSapiens	CMV	DNA processivity factor	34	236	A0101_VTEHDTLLY
RAQAPPPSW	B5701	MHCI	HomoSapiens	HCV	polyprotein	34	45	B5701_RAQAPPPSW
FEDLRVSSF	B3701	MHCI	HomoSapiens	Influenza A	Nucleoprotein	34	34	B3701_FEDLRVSSF
HSNLNDATY	A0101	MHCI	HomoSapiens	Influenza A	nucleoprotein	33	57	A0101_HSNLNDATY
LTSLTILQLY	A0101	MHCI	HomoSapiens			33	33	A0101_LTSLTILQLY
ALGIGILTV	A0201	MHCI	HomoSapiens	Homo sapiens	Melanoma antigen recognized by T-cells 1	32	51	A0201_ALGIGILTV
VYFLQSINF	A2402	MHCI	HomoSapiens	SARS-CoV-2	ORF3a protein	30	30	A2402_VYFLQSINF
LLSLFSLWL	A0201	MHCI	HomoSapiens	Homo sapiens	zinc transporter 8 isoform a	29	41	A0201_LLSLFSLWL
LPRWYFYYL	B0702	MHCI	HomoSapiens	MHV	Nucleocapsid protein (N structural protein) (NC)	28	38	B0702_LPRWYFYYL
ALWEIQQVV	A0201	MHCI	HomoSapiens	SARS-CoV-2	orf1ab polyprotein [Severe acute respiratory syndrome coronavirus 2]	28	37	A0201_ALWEIQQVV
YAYAKWKL	B0801	MHCI	HomoSapiens			28	31	B0801_YAYAKWKL
VLEETSVML	A0201	MHCI	HomoSapiens	CMV	55 kDa immediate-early protein 1	27	45	A0201_VLEETSVML
GIIYIIYKL	A0201	MHCI	HomoSapiens	Enterovirus B80	polyprotein [Enterovirus B80]	27	34	A0201_GIIYIIYKL
ALSKGVHFV	A0201	MHCI	HomoSapiens	SARS-CoV-2	ORF3a protein	26	44	A0201_ALSKGVHFV
MEVGWYRSPFSRVVHLYRNGK	H2-Ab	MHCII	MusMusculus	Mus musculus	myelin/oligodendrocyte glycoprotein	26	26	H2-Ab_MEVGWYRSPFSRVVHLYRNGK
IPSINVHHY	B3501	MHCI	HomoSapiens	CMV	64 kDa lower matrix phosphoprotein	25	102	B3501_IPSINVHHY
YAKWKLCSA	B0801	MHCI	HomoSapiens	Homo sapiens	zinc transporter 8 isoform a	25	41	B0801_YAKWKLCSA
RVRAYTYSK	A0301	MHCI	HomoSapiens	EBV	Replication and transcription activator	25	35	A0301_RVRAYTYSK
HPVGEADYFEY	B3501	MHCI	HomoSapiens	EBV	Epstein-Barr nuclear antigen 1	25	27	B3501_HPVGEADYFEY
KLSALGINAV	A0201	MHCI	HomoSapiens	HCV	polyprotein	25	26	A0201_KLSALGINAV
YSEHPTFTSQY	A0101	MHCI	HomoSapiens	CMV	HCMVUL83	24	85	A0101_YSEHPTFTSQY
VAANIVLTV	A0201	MHCI	HomoSapiens	Homo sapiens	Proton-coupled zinc antiporter SLC30A8	24	31	A0201_VAANIVLTV
VVTGVLVYL	A0201	MHCI	HomoSapiens	Homo sapiens	zinc transporter 8 isoform a	24	31	A0201_VVTGVLVYL
RVAGDSGFAAY	B1501	MHCI	HomoSapiens	SARS-CoV-2	membrane glycoprotein [Severe acute respiratory syndrome coronavirus 2]	24	24	B1501_RVAGDSGFAAY
QIKVRVDMV	B0801	MHCI	HomoSapiens	CMV	55 kDa immediate-early protein 1	23	38	B0801_QIKVRVDMV
KAFSPEVIPMF	B5701	MHCI	HomoSapiens	HIV-1	Gag-Pol polyprotein	22	242	B5701_KAFSPEVIPMF
LLFNILGGWV	A0201	MHCI	HomoSapiens	HCV	polyprotein	22	38	A0201_LLFNILGGWV
KLWAQCVQL	A0201	MHCI	HomoSapiens	SARS-CoV-1	Replicase polyprotein 1ab	22	26	A0201_KLWAQCVQL
SGPDNGAVAV	H2-Db	MHCI	MusMusculus	Influenza A	Neuraminidase	22	22	H2-Db_SGPDNGAVAV
VTDAAHLLI	A0101	MHCI	HomoSapiens	Homo sapiens	zinc transporter 8 isoform a	21	32	A0101_VTDAAHLLI
RFNLIANQHLLAPGF	DRB10101	MHCII	HomoSapiens	Homo sapiens	A disintegrin and metalloproteinase with thrombospondin motifs 7	21	21	DRB10101_RFNLIANQHLLAPGF
TAFTIPSI	B5101	MHCI	HomoSapiens	HIV-1	pol protein	20	23	B5101_TAFTIPSI
RTQLLWTPAAPTAMA	DRB10701	MHCII	HomoSapiens	Homo sapiens	dJ579N16.4 [Homo sapiens]	20	20	DRB10701_RTQLLWTPAAPTAMA